In the StarbaseModuleDefs.xml file
InterstellarCollectorModule:
Has Prerequ <StarbaseModule>OrbitalReplicatorModule</StarbaseModule> which is a later tech module. In accordance with the tech tree it should be <StarbaseModule>ZeroGScalingModule</StarbaseModule>. Or if it is not a parallel module to the OrbitalReplicatorModule but an upgrade then it should be <UpgradesFrom>OrbitalReplicatorModule</UpgradesFrom>.
OrbitalInstituteModule:
Same problem as the InterstellarCollectorModule, but with OrbitalResearchCenterModule and ZeroGExperimentationModule.
OrbitalShoppingCenter:
<UpgradesFrom>RecreationCenterModule</UpgradesFrom> should be <UpgradesFrom>StarbaseMarket</UpgradesFrom>
StarbasePromenade:
<UpgradesFrom>OrbitalResortModule</UpgradesFrom> should be <UpgradesFrom>OrbitalShoppingCenter</UpgradesFrom>
FranchiseCenter:
<StarbaseModule>ZeroGBallet</StarbaseModule> should be <StarbaseModule>StarbasePromenade</StarbaseModule>. And on top of that it has the same problem as InterstellarCollectorModule but with StarbasePromenade and OrbitalShoppingCenter.
TradeCenterModule:
Has <UpgradesFrom>TradePost</UpgradesFrom> should be <UpgradesFrom>TradePostModule</UpgradesFrom>
TradingHubModule:
Has <UpgradesFrom>TradeCenter</UpgradesFrom> should be <UpgradesFrom>TradeCenterModule</UpgradesFrom>
TradingMechaModule:
Has <UpgradesFrom>TradingHub</UpgradesFrom> should be <UpgradesFrom>TradingHubModule</UpgradesFrom>